BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008A05LP1|AL425791
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1690 1582 0.0
>3x_Contig1690
Length = 13018
Score = 1582 bits (796), Expect = 0.0
Identities = 802/806 (99%)
Strand = Plus / Plus
Query: 1 atccaaagtgtactctaaaggaaccacmggctcagtgagtgagagaatcatgactgaatt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 7761 atccaaagtgtactctaaaggaaccaccggctcagtgagtgagagaatcatgactgaatt 7820
Query: 61 tgtccaactgcccttatktkgtgagcttcttggacttgaattgtaaagtacttgtgcgtg 120
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 7821 ggtccaactgcccttatgtggtgagcttcttggacttgaattgtaaagtacttgtgcgtg 7880
Query: 121 tagatccagatgtcaagaataatgctgagatgggcaactgtattatttttcaaaaaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7881 tagatccagatgtcaagaataatgctgagatgggcaactgtattatttttcaaaaaagat 7940
Query: 181 tcactttttcacttcgagatgatttggtatcctttgaggcatacaagaaaaaccctatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7941 tcactttttcacttcgagatgatttggtatcctttgaggcatacaagaaaaaccctatta 8000
Query: 241 aaagcactgatcataactatcgtcaaaggaaataccttccgttcccgatatacccccatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8001 aaagcactgatcataactatcgtcaaaggaaataccttccgttcccgatatacccccatc 8060
Query: 301 cgactataactttgctcccgactaattgtaataatcaatccctcctcccattctgatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8061 cgactataactttgctcccgactaattgtaataatcaatccctcctcccattctgatcac 8120
Query: 361 gtgactttaaaagcttgctgaaagttccagaaaacgcaatctgtactgccacaaaaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8121 gtgactttaaaagcttgctgaaagttccagaaaacgcaatctgtactgccacaaaaaaaa 8180
Query: 421 gataatctcgtcttagaaaatattcgcagtaccgttcagtacatagaaatcattgcggac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8181 gataatctcgtcttagaaaatattcgcagtaccgttcagtacatagaaatcattgcggac 8240
Query: 481 atcaaatatgtaccagacactttacgaacagaattccgaactgcaccatacatttttgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8241 atcaaatatgtaccagacactttacgaacagaattccgaactgcaccatacatttttgtg 8300
Query: 541 tcgcttcgtctttcgtaattccaagatggagatagacacagagggaaaatggacagaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8301 tcgcttcgtctttcgtaattccaagatggagatagacacagagggaaaatggacagaaga 8360
Query: 601 actagcggaaaacccgtactgcagcgacaccatctatatcttggtatcgctgcattggaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8361 actagcggaaaacccgtactgcagcgacaccatctatatcttggtatcgctgcattggaa 8420
Query: 661 aagatgtcggtttctttgactaatagcagttgaatgaaagggataaatatgattaacgcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8421 aagatgtcggtttctttgactaatagcagttgaatgaaagggataaatatgattaacgcc 8480
Query: 721 acaggttggagctctgatctttaagagggaggggacatatgccattattacatactgtca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8481 acaggttggagctctgatctttaagagggaggggacatatgccattattacatactgtca 8540
Query: 781 tacaaaaaattttgatgtttctctcc 806
||||||||||||||||||||||||||
Sbjct: 8541 tacaaaaaattttgatgtttctctcc 8566
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6033
Number of Sequences: 1807
Number of extensions: 6033
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)